BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G08SP1|AL426417
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1241 0.0
>3x_Contig1743
Length = 20172
Score = 1241 bits (602), Expect = 0.0
Identities = 717/786 (91%)
Strand = Plus / Minus
Query: 1 ctctttccattgactttgatgaagatttggaatctgntagamaatctgcgaatawsagtt 60
|||||||||||||| ||||||||||||||||||||| |||| ||||||||| || ||||
Sbjct: 15713 ctctttccattgaccttgatgaagatttggaatctgttagaaaatctgcgattaagagtt 15654
Query: 61 tgaagcaaaaccattcagataacaagaataacacaaatcctaagctaaatggtcttgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15653 tgaagcaaaaccattcagataacaagaataacacaaatcctaagctaaatggtcttgagc 15594
Query: 121 tcctcctawctgtggccatcttgcaactatatgcnggggatgaagaatctgtgtccattt 180
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 15593 tcctcctatctgtggccatcttgcaactatatgctggggatgaagaatctgtgtccattt 15534
Query: 181 yacmagmschaayatcattctawgaagaatgtgatamagaatccactgacttggttggta 240
|| || | || ||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 15533 tacaagatctaatatcattctatgaagaatgtgataaagaatccactgacttggttggta 15474
Query: 241 tcacggagattctactatcatbmgttgctcaamgaaaawcattgntgaaaammtcmagtc 300
||||||||||||||||||||| ||||||||| ||||| | ||| |||||| | ||||
Sbjct: 15473 tcacggagattctactatcattagttgctcaaagaaaatctttgttgaaaaaattaagtc 15414
Query: 301 taaaagtgtgggaatcttacgagcatgahatcggcgaacctgaactcaatgtactatsac 360
| | |||||||||||||| || |||||| |||||||||||||||||||||||||||| ||
Sbjct: 15413 ttatagtgtgggaatctttcgtgcatgatatcggcgaacctgaactcaatgtactattac 15354
Query: 361 maacmwwgactgccagagagaawaamcmaggttatgctgatcttcatgamggtgaagaag 420
||| ||||||||||||||| || | ||||| |||||||||| ||| ||||| ||||
Sbjct: 15353 aaacattgactgccagagagaataaacaaggttttgctgatctttttgaaggtgatgaag 15294
Query: 421 aagaggacgacgaggatgctgtagaacgaggaacagatgawgatgatgatgaagaagatg 480
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||
Sbjct: 15293 aagaggacgacgaggatgctgttgaacgaggaacagatgatgatgatgatgaagatgatg 15234
Query: 481 aagacaawgatgacgatgaagaacctagtgctgamgattctgaggacgatgtttctgamg 540
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 15233 aagacaatgatgacgatgatgaacctagtgctgaagattctgaggacgatgtttctgaag 15174
Query: 541 amgacaaggatgccgctttggaaamcmcagammmmsaggcaacamgtgctttggcaaaag 600
| |||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 15173 aagacaaggatgccgctttggaaaaaatagaaaaagaggcaacaagtgctttggcaaaag 15114
Query: 601 ccttgamcctaccagactccattgncggtgaacatggcgatgttcaactgggaaacmacg 660
| |||| |||||| |||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 15113 ctttgaacctacctgactccattgtcggtgaacatggcgatgttcaactgggaaacaacg 15054
Query: 661 aagaagaggatagtgatgaagatagtgatgaagatgacgatttcagtggtgaagamgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 15053 aagaagaggatagtgatgaagatagtgatgaagatgacgatttcagtggtgaagacgagt 14994
Query: 721 ccatggatgacgaagcgatgatgcaacttgatgatcaactatctgavatctttaaacgtc 780
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 14993 ccatggatgacgaagcgatgatgcaacttgatgatcaactatctgaaatctttaaacgtc 14934
Query: 781 gtaagg 786
||||||
Sbjct: 14933 gtaagg 14928
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5902
Number of Sequences: 1807
Number of extensions: 5902
Number of successful extensions: 460
Number of sequences better than 1.0e-20: 1
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.5 bits)